1f2n: Difference between revisions

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[[Image:1f2n.png|left|200px]]


{{STRUCTURE_1f2n|  PDB=1f2n  |  SCENE=  }}
==RICE YELLOW MOTTLE VIRUS==
 
<StructureSection load='1f2n' size='340' side='right'caption='[[1f2n]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
===RICE YELLOW MOTTLE VIRUS===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1f2n]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rice_yellow_mottle_virus Rice yellow mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F2N FirstGlance]. <br>
{{ABSTRACT_PUBMED_11080631}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f2n OCA], [https://pdbe.org/1f2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f2n RCSB], [https://www.ebi.ac.uk/pdbsum/1f2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f2n ProSAT]</span></td></tr>
[[1f2n]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Rice_yellow_mottle_virus Rice yellow mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F2N OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q86527_9VIRU Q86527_9VIRU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/1f2n_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f2n ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Virus coat protein|Virus coat protein]]
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:011080631</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Rice yellow mottle virus]]
[[Category: Rice yellow mottle virus]]
[[Category: Beachy, R N.]]
[[Category: Beachy RN]]
[[Category: Brugidou, C.]]
[[Category: Brugidou C]]
[[Category: Fauquet, C M.]]
[[Category: Fauquet CM]]
[[Category: Johnson, J E.]]
[[Category: Johnson JE]]
[[Category: Liljas, L.]]
[[Category: Liljas L]]
[[Category: Lin, T.]]
[[Category: Lin T]]
[[Category: Opalka, N.]]
[[Category: Opalka N]]
[[Category: Qu, C.]]
[[Category: Qu C]]
[[Category: Yeager, M.]]
[[Category: Yeager M]]
[[Category: Beta-annulus]]
[[Category: Capsid protein]]
[[Category: Coat protein]]
[[Category: Domain swapping]]
[[Category: Icosahedral virus]]
[[Category: Plant virus]]
[[Category: Virus]]