2xzb: Difference between revisions

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[[Image:2xzb.png|left|200px]]


{{STRUCTURE_2xzb| PDB=2xzb | SCENE= }}
==Pig Gastric H,K-ATPase with bound BeF and SCH28080==
<StructureSection load='2xzb' size='340' side='right'caption='[[2xzb]], [[Resolution|resolution]] 7.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2xzb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XZB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XZB FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron crystallography, [[Resolution|Resolution]] 7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xzb OCA], [https://pdbe.org/2xzb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xzb RCSB], [https://www.ebi.ac.uk/pdbsum/2xzb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xzb ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ATP4A_PIG ATP4A_PIG] Catalyzes the hydrolysis of ATP coupled with the exchange of H(+) and K(+) ions across the plasma membrane. Responsible for acid production in the stomach.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Acid-related gastric diseases are associated with disorder of digestive tract acidification. The gastric proton pump, H(+),K(+)-ATPase, exports H(+) in exchange for luminal K(+) to generate a highly acidic environment in the stomach, and is a main target for acid suppressants. Here, we report the three-dimensional structure of gastric H(+),K(+)-ATPase with bound SCH28080, a representative K(+)-competitive acid blocker, at 7 A resolution based on electron crystallography of two-dimensional crystals. The density of the bound SCH28080 is found near transmembrane (TM) helices 4, 5 and 6, in the luminal cavity. The SCH28080-binding site is formed by the rearrangement of TM helices, which is in turn transmitted to the cytoplasmic domains, resulting in a luminal-open conformation. These results represent the first structural evidence for a binding site of an acid suppressant on H(+),K(+)-ATPase, and the conformational change induced by this class of drugs.


===Pig Gastric H,K-ATPase with bound BeF and SCH28080===
Conformational rearrangement of gastric H(+),K(+)-ATPase induced by an acid suppressant.,Abe K, Tani K, Fujiyoshi Y Nat Commun. 2011 Jan;2(1):155. PMID:21224846<ref>PMID:21224846</ref>


{{ABSTRACT_PUBMED_21224846}}
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
==About this Structure==
<div class="pdbe-citations 2xzb" style="background-color:#fffaf0;"></div>
[[2xzb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XZB OCA].


==See Also==
==See Also==
*[[ATPase|ATPase]]
*[[ATPase 3D structures|ATPase 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:021224846</ref><references group="xtra"/>
__TOC__
[[Category: Hydrogen/potassium-exchanging ATPase]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
[[Category: Abe, K.]]
[[Category: Abe K]]
[[Category: Fujiyoshi, Y.]]
[[Category: Fujiyoshi Y]]
[[Category: Tani, K.]]
[[Category: Tani K]]
[[Category: Acid suppressant]]
[[Category: Atp-binding]]
[[Category: Beryllium fluoride]]
[[Category: H/k-atpase]]
[[Category: Hydrolase]]
[[Category: Ion pump]]
[[Category: Membrane protein]]
[[Category: P-type atpase]]
Retrieved from "https://proteopedia.org/2xzb"