3lny: Difference between revisions

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[[Image:3lny.png|left|200px]]


{{STRUCTURE_3lny|  PDB=3lny  |  SCENE=  }}
==Second PDZ domain from human PTP1E in complex with RA-GEF2 peptide==
 
<StructureSection load='3lny' size='340' side='right'caption='[[3lny]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
===Second PDZ domain from human PTP1E in complex with RA-GEF2 peptide===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3lny]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LNY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LNY FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[3lny]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LNY OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lny FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lny OCA], [https://pdbe.org/3lny PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lny RCSB], [https://www.ebi.ac.uk/pdbsum/3lny PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lny ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PTN13_HUMAN PTN13_HUMAN] Tyrosine phosphatase which regulates negatively FAS-induced apoptosis and NGFR-mediated pro-apoptotic signaling.<ref>PMID:15611135</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/3lny_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lny ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Tyrosine phosphatase|Tyrosine phosphatase]]
*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Chang, A.]]
[[Category: Chang A]]
[[Category: Ke, H.]]
[[Category: Ke H]]
[[Category: Lee, A L.]]
[[Category: Lee AL]]
[[Category: Phillips, G N.]]
[[Category: Phillips Jr GN]]
[[Category: Zhang, J.]]
[[Category: Zhang J]]
[[Category: Cell membrane]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Cesg]]
[[Category: Cytoskeleton]]
[[Category: Guanine-nucleotide releasing factor]]
[[Category: Pdz2]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Signaling protein-signaling protein complex]]
[[Category: Structural genomic]]
Retrieved from "https://proteopedia.org/3lny"