1m0k: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1m0k.png|left|200px]]


{{STRUCTURE_1m0k|  PDB=1m0k  |  SCENE=  }}
==BACTERIORHODOPSIN K INTERMEDIATE AT 1.43 A RESOLUTION==
 
<StructureSection load='1m0k' size='340' side='right'caption='[[1m0k]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
===BACTERIORHODOPSIN K INTERMEDIATE AT 1.43 A RESOLUTION===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1m0k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M0K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M0K FirstGlance]. <br>
{{ABSTRACT_PUBMED_12206785}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.43&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI1:1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL'>LI1</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=SQU:2,10,23-TRIMETHYL-TETRACOSANE'>SQU</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m0k OCA], [https://pdbe.org/1m0k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m0k RCSB], [https://www.ebi.ac.uk/pdbsum/1m0k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m0k ProSAT]</span></td></tr>
[[1m0k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M0K OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m0/1m0k_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m0k ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Bacteriorhodopsin|Bacteriorhodopsin]]
*[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:012206785</ref><ref group="xtra">PMID:016490208</ref><references group="xtra"/>
[[Category: Halobacterium salinarum]]
[[Category: Halobacterium salinarum]]
[[Category: Lanyi, J K.]]
[[Category: Large Structures]]
[[Category: 7-transmembrane]]
[[Category: Lanyi JK]]
[[Category: Haloarchaea]]
[[Category: Ion pump]]
[[Category: Ion transport]]
[[Category: Lipid]]
[[Category: Membrane protein]]
[[Category: Merohedral twinning]]
[[Category: Photoreceptor]]
[[Category: Retinal protein]]
[[Category: Serpentine]]
Retrieved from "https://proteopedia.org/1m0k"