3goa: Difference between revisions
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==Crystal structure of the Salmonella typhimurium FadA 3-ketoacyl-CoA thiolase== | |||
<StructureSection load='3goa' size='340' side='right'caption='[[3goa]], [[Resolution|resolution]] 1.70Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3goa]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GOA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GOA FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |||
== | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
[[3goa]] is a 2 chain structure with sequence from [ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3goa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3goa OCA], [https://pdbe.org/3goa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3goa RCSB], [https://www.ebi.ac.uk/pdbsum/3goa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3goa ProSAT], [https://www.topsan.org/Proteins/CSGID/3goa TOPSAN]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/FADA_SALTY FADA_SALTY] Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Involved in the aerobic and anaerobic degradation of long-chain fatty acids (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/go/3goa_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3goa ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Thiolase|Thiolase]] | *[[Thiolase 3D structures|Thiolase 3D structures]] | ||
[[Category: | __TOC__ | ||
[[Category: Salmonella enterica subsp. enterica serovar | </StructureSection> | ||
[[Category: Anderson | [[Category: Large Structures]] | ||
[[Category: Anderson | [[Category: Salmonella enterica subsp. enterica serovar Typhimurium]] | ||
[[Category: Anderson SM]] | |||
[[Category: Onopriyenko | [[Category: Anderson WF]] | ||
[[Category: Papazisi | [[Category: Onopriyenko O]] | ||
[[Category: Savchenko | [[Category: Papazisi L]] | ||
[[Category: Skarina | [[Category: Savchenko A]] | ||
[[Category: Wawrzak | [[Category: Skarina T]] | ||
[[Category: Wawrzak Z]] | |||
Latest revision as of 22:36, 26 March 2025
Crystal structure of the Salmonella typhimurium FadA 3-ketoacyl-CoA thiolase
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