3gek: Difference between revisions

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[[Image:3gek.png|left|200px]]


{{STRUCTURE_3gek|  PDB=3gek  |  SCENE=  }}
==Crystal structure of putative thioesterase yhdA from Lactococcus lactis. Northeast Structural Genomics Consortium Target KR113==
 
<StructureSection load='3gek' size='340' side='right'caption='[[3gek]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
===Crystal structure of putative thioesterase yhdA from Lactococcus lactis. Northeast Structural Genomics Consortium Target KR113===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3gek]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis_Il1403 Lactococcus lactis subsp. lactis Il1403]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GEK FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3gek]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis Lactococcus lactis subsp. lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GEK OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gek OCA], [https://pdbe.org/3gek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gek RCSB], [https://www.ebi.ac.uk/pdbsum/3gek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gek ProSAT], [https://www.topsan.org/Proteins/NESGC/3gek TOPSAN]</span></td></tr>
[[Category: Lactococcus lactis subsp. lactis]]
</table>
[[Category: Acton, T B.]]
== Function ==
[[Category: Ciccosanti, C.]]
[https://www.uniprot.org/uniprot/Q9CHK5_LACLA Q9CHK5_LACLA]  
[[Category: Everett, J K.]]
== Evolutionary Conservation ==
[[Category: Foote, E L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Hunt, J F.]]
Check<jmol>
[[Category: Janjua, H.]]
  <jmolCheckbox>
[[Category: Kuzin, A P.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ge/3gek_consurf.spt"</scriptWhenChecked>
[[Category: Lee, D.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Montelione, G T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
  </jmolCheckbox>
[[Category: Nair, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gek ConSurf].
[[Category: Rost, B.]]
<div style="clear:both"></div>
[[Category: Seetharaman, R.]]
__TOC__
[[Category: Su, M.]]
</StructureSection>
[[Category: Tong, L.]]
[[Category: Lactococcus lactis subsp. lactis Il1403]]
[[Category: Xiao, R.]]
[[Category: Large Structures]]
[[Category: Kr113]]
[[Category: Acton TB]]
[[Category: Lactococcus lacti]]
[[Category: Ciccosanti C]]
[[Category: Nesg]]
[[Category: Everett JK]]
[[Category: Northeast structural genomics consortium]]
[[Category: Foote EL]]
[[Category: Protein structure initiative]]
[[Category: Hunt JF]]
[[Category: Psi-2]]
[[Category: Janjua H]]
[[Category: Q9chk5_lacla]]
[[Category: Kuzin AP]]
[[Category: Structural genomic]]
[[Category: Lee D]]
[[Category: Structure genomic]]
[[Category: Montelione GT]]
[[Category: Unknown function]]
[[Category: Nair R]]
[[Category: Yhda]]
[[Category: Rost B]]
[[Category: Seetharaman R]]
[[Category: Su M]]
[[Category: Tong L]]
[[Category: Xiao R]]
Retrieved from "https://proteopedia.org/3gek"