3f4m: Difference between revisions

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[[Image:3f4m.png|left|200px]]


{{STRUCTURE_3f4m| PDB=3f4m | SCENE= }}
==Crystal structure of TIPE2==
<StructureSection load='3f4m' size='340' side='right'caption='[[3f4m]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3f4m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F4M FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.696&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f4m OCA], [https://pdbe.org/3f4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f4m RCSB], [https://www.ebi.ac.uk/pdbsum/3f4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f4m ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TP8L2_HUMAN TP8L2_HUMAN] Acts as a negative regulator of innate and adaptive immunity by maintaining immune homeostasis. Negative regulator of Toll-like receptor and T-cell receptor function. Prevents hyperresponsiveness of the immune system and maintains immune homeostasis. Inhibits JUN/AP1 and NF-kappa-B activation. Promotes Fas-induced apoptosis (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/3f4m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f4m ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
TNFAIP8-like 2 (TIPE2) has an essential role in immune homeostasis, yet the underlying mechanism remains enigmatic. The high-resolution crystal structure of TIPE2 reveals a previously uncharacterized fold that is different from the predicted fold of a death effector domain (DED). Strikingly, TIPE2 contains a large, hydrophobic central cavity that is poised for cofactor binding. These structural features will be important for understanding the functions of TIPE2 and other TNFAIP8 family proteins.


===Crystal structure of TIPE2===
Crystal structure of TIPE2 provides insights into immune homeostasis.,Zhang X, Wang J, Fan C, Li H, Sun H, Gong S, Chen YH, Shi Y Nat Struct Mol Biol. 2009 Jan;16(1):89-90. Epub 2008 Dec 14. PMID:19079267<ref>PMID:19079267</ref>


{{ABSTRACT_PUBMED_19079267}}
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
==About this Structure==
<div class="pdbe-citations 3f4m" style="background-color:#fffaf0;"></div>
[[3f4m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F4M OCA].
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Shi, Y.]]
[[Category: Large Structures]]
[[Category: Wang, J.]]
[[Category: Shi Y]]
[[Category: Zhang, X.]]
[[Category: Wang J]]
[[Category: Immune homeostasis]]
[[Category: Zhang X]]
[[Category: Immune system]]
[[Category: Tipe2]]
[[Category: Tnfaip8]]
Retrieved from "https://proteopedia.org/3f4m"