1b5d: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1b5d.png|left|200px]]


{{STRUCTURE_1b5d|  PDB=1b5d  |  SCENE=  }}
==DCMP Hydroxymethylase from T4 (Intact)==
 
<StructureSection load='1b5d' size='340' side='right'caption='[[1b5d]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
===DCMP Hydroxymethylase from T4 (Intact)===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1b5d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1B5D FirstGlance]. <br>
{{ABSTRACT_PUBMED_10064578}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCM:2-DEOXYCYTIDINE-5-MONOPHOSPHATE'>DCM</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1b5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b5d OCA], [https://pdbe.org/1b5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1b5d RCSB], [https://www.ebi.ac.uk/pdbsum/1b5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1b5d ProSAT]</span></td></tr>
[[1b5d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B5D OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/DCHM_BPT4 DCHM_BPT4]
<ref group="xtra">PMID:010064578</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Category: Deoxycytidylate 5-hydroxymethyltransferase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Enterobacteria phage t4]]
Check<jmol>
[[Category: Sohn, S H.]]
  <jmolCheckbox>
[[Category: Song, H K.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b5/1b5d_consurf.spt"</scriptWhenChecked>
[[Category: Suh, S W.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Dntp synthesizing complex]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Hydroxymethylase]]
  </jmolCheckbox>
[[Category: Transferase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1b5d ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia virus T4]]
[[Category: Large Structures]]
[[Category: Sohn SH]]
[[Category: Song HK]]
[[Category: Suh SW]]
Retrieved from "https://proteopedia.org/1b5d"