2lpx: Difference between revisions
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==Solution Structure of Strawberry Allergen Fra a 1e== | |||
<StructureSection load='2lpx' size='340' side='right'caption='[[2lpx]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2lpx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fragaria_x_ananassa Fragaria x ananassa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LPX FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lpx OCA], [https://pdbe.org/2lpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lpx RCSB], [https://www.ebi.ac.uk/pdbsum/2lpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lpx ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/FRA1E_FRAAN FRA1E_FRAAN] Involved in the control of flavonoid biosynthesis in fruits, probably by binding directly to natural flavonoids (PubMed:19969523). Binds the natural flavonoid quercetin-3-O-glucuronide with affinities in the low micromolar range (PubMed:24133217).<ref>PMID:19969523</ref> <ref>PMID:24133217</ref> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
The PR10 family protein Fra a 1E from strawberry (Fragaria x ananassa) is down-regulated in white strawberry mutants, and transient RNAi (RNA interference)-mediated silencing experiments confirmed that Fra a 1 is involved in fruit pigment synthesis. In the present study, we determined the solution structure of Fra a 1E. The protein fold is identical with that of other members of the PR10 protein family and consists of a seven-stranded antiparallel beta-sheet, two short V-shaped alpha-helices and a long C-terminal alpha-helix that encompass a hydrophobic pocket. Whereas Fra a 1E contains the glycine-rich loop that is highly conserved throughout the protein family, the volume of the hydrophobic pocket and the size of its entrance are much larger than expected. The three-dimensional structure may shed some light on its physiological function and may help to further understand the role of PR10 proteins in plants. | |||
Solution structure of the strawberry allergen Fra a 1.,Seutter von Loetzen C, Schweimer K, Schwab W, Rosch P, Hartl-Spiegelhauer O Biosci Rep. 2012 Dec 1;32(6):567-75. doi: 10.1042/BSR20120058. PMID:22913709<ref>PMID:22913709</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
== | </div> | ||
<div class="pdbe-citations 2lpx" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Fragaria x ananassa]] | [[Category: Fragaria x ananassa]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Hartl-Spiegelhauer O]] | ||
[[Category: Roesch | [[Category: Roesch P]] | ||
[[Category: Schwab | [[Category: Schwab W]] | ||
[[Category: Schweimer | [[Category: Schweimer K]] | ||
[[Category: | [[Category: Seutter von Loetzen C]] | ||
Latest revision as of 05:48, 15 May 2024
Solution Structure of Strawberry Allergen Fra a 1e
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