1mdb: Difference between revisions

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[[Image:1mdb.png|left|200px]]


{{STRUCTURE_1mdb|  PDB=1mdb  |  SCENE=  }}
==CRYSTAL STRUCTURE OF DhbE IN COMPLEX WITH DHB-ADENYLATE==
 
<StructureSection load='1mdb' size='340' side='right'caption='[[1mdb]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
===CRYSTAL STRUCTURE OF DhbE IN COMPLEX WITH DHB-ADENYLATE===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1mdb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MDB FirstGlance]. <br>
{{ABSTRACT_PUBMED_12221282}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=DBH:2,3-DIHYDROXY-BENZOIC+ACID'>DBH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mdb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mdb OCA], [https://pdbe.org/1mdb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mdb RCSB], [https://www.ebi.ac.uk/pdbsum/1mdb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mdb ProSAT]</span></td></tr>
[[1mdb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MDB OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/DHBE_BACSU DHBE_BACSU] Activation of the carboxylate group of 2,3-dihydroxy-benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate.
<ref group="xtra">PMID:012221282</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/md/1mdb_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mdb ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Kessler, N.]]
[[Category: Large Structures]]
[[Category: Marahiel, M A.]]
[[Category: Kessler N]]
[[Category: May, J J.]]
[[Category: Marahiel MA]]
[[Category: Stubbs, M T.]]
[[Category: May JJ]]
[[Category: Adenylation domain]]
[[Category: Stubbs MT]]
[[Category: Antibiotic biosynthesis]]
[[Category: Ligase]]
[[Category: Peptide synthetase]]
[[Category: Siderophore formation]]