1ny5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "1ny5" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1ny5.png|left|200px]]


{{STRUCTURE_1ny5|  PDB=1ny5  |  SCENE=  }}
==Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state==
 
<StructureSection load='1ny5' size='340' side='right'caption='[[1ny5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
===Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1ny5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NY5 FirstGlance]. <br>
{{ABSTRACT_PUBMED_14561776}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ny5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ny5 OCA], [https://pdbe.org/1ny5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ny5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ny5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ny5 ProSAT]</span></td></tr>
[[1ny5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY5 OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/O67198_AQUAE O67198_AQUAE]
<ref group="xtra">PMID:014561776</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/1ny5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ny5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Kustu, S.]]
[[Category: Large Structures]]
[[Category: Lee, S Y.]]
[[Category: Kustu S]]
[[Category: Nixon, B T.]]
[[Category: Lee SY]]
[[Category: Torre, A de la.]]
[[Category: Nixon BT]]
[[Category: Wemmer, D E.]]
[[Category: Wemmer DE]]
[[Category: Aaa+ atpase]]
[[Category: De la Torre A]]
[[Category: Bacterial transcription]]
[[Category: Dimer]]
[[Category: Sigma54 activator]]
[[Category: Transcription]]