1trj: Difference between revisions

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[[Image:1trj.png|left|200px]]


{{STRUCTURE_1trj| PDB=1trj | SCENE= }}
==Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome==
<SX load='1trj' size='340' side='right' viewer='molstar' caption='[[1trj]], [[Resolution|resolution]] 11.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1trj]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TRJ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 11.7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1trj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1trj OCA], [https://pdbe.org/1trj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1trj RCSB], [https://www.ebi.ac.uk/pdbsum/1trj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1trj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GBLP_YEAST GBLP_YEAST] Located at the head of the 40S ribosomal subunit in the vicinity of the mRNA exit channel, it serves as a scaffold protein that can recruit other proteins to the ribosome. Involved in the negative regulation of translation of a specific subset of proteins.<ref>PMID:15340087</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tr/1trj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1trj ConSurf].
<div style="clear:both"></div>


===Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome===
==See Also==
 
*[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]]
{{ABSTRACT_PUBMED_15334071}}
== References ==
 
<references/>
==About this Structure==
__TOC__
[[1trj]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TRJ OCA].
</SX>
 
[[Category: Large Structures]]
==Reference==
<ref group="xtra">PMID:015334071</ref><references group="xtra"/>
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Frank, J.]]
[[Category: Frank J]]
[[Category: Gursky, R.]]
[[Category: Gursky R]]
[[Category: Nilsson, J.]]
[[Category: Nilsson J]]
[[Category: Nissen, P.]]
[[Category: Nissen P]]
[[Category: Sengupta, J.]]
[[Category: Sengupta J]]
[[Category: Spahn, C M.]]
[[Category: Spahn CM]]
[[Category: Homology model]]
[[Category: Rack1]]
[[Category: Ribosome]]
[[Category: Signaling protein]]