1vbl: Difference between revisions

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[[Image:1vbl.png|left|200px]]


{{STRUCTURE_1vbl|  PDB=1vbl  |  SCENE=  }}
==Structure of the thermostable pectate lyase PL 47==
 
<StructureSection load='1vbl' size='340' side='right'caption='[[1vbl]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
===Structure of the thermostable pectate lyase PL 47===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1vbl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._TS-47 Bacillus sp. TS-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VBL FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
[[1vbl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ts-47 Bacillus sp. ts-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vbl OCA], [https://pdbe.org/1vbl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vbl RCSB], [https://www.ebi.ac.uk/pdbsum/1vbl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vbl ProSAT]</span></td></tr>
[[Category: Bacillus sp. ts-47]]
</table>
[[Category: Pectate lyase]]
== Function ==
[[Category: Kitatani, T.]]
[https://www.uniprot.org/uniprot/Q9AJM4_9BACI Q9AJM4_9BACI]  
[[Category: Nakaniwa, T.]]
== Evolutionary Conservation ==
[[Category: Nishimura, K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Sakai, T.]]
Check<jmol>
[[Category: Tada, T.]]
  <jmolCheckbox>
[[Category: Takao, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vbl_consurf.spt"</scriptWhenChecked>
[[Category: Yamaguchi, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacillus subtili]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Calcium ion]]
  </jmolCheckbox>
[[Category: Lyase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vbl ConSurf].
[[Category: Pectate lyase]]
<div style="clear:both"></div>
[[Category: Pectin]]
__TOC__
[[Category: Pl 47]]
</StructureSection>
[[Category: Thermostable]]
[[Category: Bacillus sp. TS-47]]
[[Category: Large Structures]]
[[Category: Kitatani T]]
[[Category: Nakaniwa T]]
[[Category: Nishimura K]]
[[Category: Sakai T]]
[[Category: Tada T]]
[[Category: Takao M]]
[[Category: Yamaguchi A]]

Latest revision as of 00:01, 28 December 2023

Structure of the thermostable pectate lyase PL 47

1vbl, resolution 1.91Å

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