1xoy: Difference between revisions

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[[Image:1xoy.png|left|200px]]


{{STRUCTURE_1xoy| PDB=1xoy | SCENE= }}
==Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein==
<StructureSection load='1xoy' size='340' side='right'caption='[[1xoy]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1xoy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XOY FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xoy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xoy OCA], [https://pdbe.org/1xoy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xoy RCSB], [https://www.ebi.ac.uk/pdbsum/1xoy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xoy ProSAT], [https://www.topsan.org/Proteins/CESG/1xoy TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PITH1_ARATH PITH1_ARATH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xo/1xoy_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xoy ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The structure of At3g04780.1-des15, an Arabidopsis thaliana ortholog of the C-terminal domain of human thioredoxin-like protein, was determined by NMR spectroscopy. The structure is dominated by a beta-barrel sandwich. A two-stranded anti-parallel beta-sheet, which seals off one end of the beta-barrel, is flanked by two flexible loops rich in acidic amino acids. Although this fold often provides a ligand binding site, the structure did not reveal an appreciable cavity inside the beta-barrel. The three-dimensional structure of At3g04780.1-des15 provides an entry point for understanding its functional role and those of its mammalian homologs.


===Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein===
Solution structure of At3g04780.1-des15, an Arabidopsis thaliana ortholog of the C-terminal domain of human thioredoxin-like protein.,Song J, Tyler RC, Wrobel RL, Frederick RO, Vojtek FC, Jeon WB, Lee MS, Markley JL Protein Sci. 2005 Apr;14(4):1059-63. Epub 2005 Mar 1. PMID:15741346<ref>PMID:15741346</ref>


{{ABSTRACT_PUBMED_15741346}}
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
==About this Structure==
<div class="pdbe-citations 1xoy" style="background-color:#fffaf0;"></div>
[[1xoy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOY OCA].
== References ==
 
<references/>
==Reference==
__TOC__
<ref group="xtra">PMID:015741346</ref><references group="xtra"/>
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Lee, M S.]]
[[Category: Lee MS]]
[[Category: Markley, J L.]]
[[Category: Markley JL]]
[[Category: Robert, C T.]]
[[Category: Robert CT]]
[[Category: Song, J.]]
[[Category: Song J]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Cesg]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/1xoy"