1ub2: Difference between revisions

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[[Image:1ub2.jpg|left|200px]]<br /><applet load="1ub2" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1ub2, resolution 2.40&Aring;" />
'''Crystal structure of catalase-peroxidase from Synechococcus PCC 7942'''<br />


==About this Structure==
==Crystal structure of catalase-peroxidase from Synechococcus PCC 7942==
1UB2 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.] with <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Catalase Catalase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.6 1.11.1.6] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB2 OCA].
<StructureSection load='1ub2' size='340' side='right'caption='[[1ub2]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
[[Category: Catalase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1ub2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_7942_=_FACHB-805 Synechococcus elongatus PCC 7942 = FACHB-805]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UB2 FirstGlance]. <br>
[[Category: Synechococcus sp.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
[[Category: Tada, T.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
[[Category: Wada, K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ub2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ub2 OCA], [https://pdbe.org/1ub2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ub2 RCSB], [https://www.ebi.ac.uk/pdbsum/1ub2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ub2 ProSAT]</span></td></tr>
[[Category: HEM]]
</table>
[[Category: catalase]]
== Function ==
[[Category: catalase-peroxidase]]
[https://www.uniprot.org/uniprot/KATG_SYNE7 KATG_SYNE7] Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.[HAMAP-Rule:MF_01961]
[[Category: cyanobacteria]]
== Evolutionary Conservation ==
[[Category: katg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: peroxidase]]
Check<jmol>
[[Category: synechococcus pcc 7942]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ub/1ub2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ub2 ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:22:41 2008''
==See Also==
*[[Catalase 3D structures|Catalase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Synechococcus elongatus PCC 7942 = FACHB-805]]
[[Category: Tada T]]
[[Category: Wada K]]
Retrieved from "https://proteopedia.org/1ub2"