2dck: Difference between revisions
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==A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1== | |||
<StructureSection load='2dck' size='340' side='right'caption='[[2dck]], [[Resolution|resolution]] 2.10Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2dck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._41M-1 Bacillus sp. 41M-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DCK FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |||
== | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
[[2dck]] is a 1 chain structure with sequence from [ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dck OCA], [https://pdbe.org/2dck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dck RCSB], [https://www.ebi.ac.uk/pdbsum/2dck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dck ProSAT]</span></td></tr> | ||
[[Category: Bacillus sp.]] | </table> | ||
[[Category: | == Function == | ||
[[Category: Fibriansah | [https://www.uniprot.org/uniprot/Q9RC94_9BACI Q9RC94_9BACI] | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/2dck_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dck ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus sp. 41M-1]] | |||
[[Category: Large Structures]] | |||
[[Category: Fibriansah G]] | |||
[[Category: Ihsanawati]] | [[Category: Ihsanawati]] | ||
[[Category: Kumasaka | [[Category: Kumasaka T]] | ||
[[Category: Nakamura | [[Category: Nakamura S]] | ||
[[Category: Tanaka | [[Category: Tanaka N]] | ||
Latest revision as of 08:25, 25 October 2023
A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1
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