2d5j: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2d5j.png|left|200px]]


{{STRUCTURE_2d5j|  PDB=2d5j  |  SCENE=  }}
==Unsaturated Glucuronyl Hydrolase Triggers Hydration of Vinyl Ether Group but not of Glycosidic Bond==
 
<StructureSection load='2d5j' size='340' side='right'caption='[[2d5j]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
===Unsaturated Glucuronyl Hydrolase Triggers Hydration of Vinyl Ether Group but not of Glycosidic Bond===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2d5j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._GL1 Bacillus sp. GL1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D5J FirstGlance]. <br>
{{ABSTRACT_PUBMED_16893885}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d5j OCA], [https://pdbe.org/2d5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d5j RCSB], [https://www.ebi.ac.uk/pdbsum/2d5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d5j ProSAT]</span></td></tr>
==About this Structure==
</table>
[[2d5j]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._gl1 Bacillus sp. gl1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D5J OCA].  
== Function ==
 
[https://www.uniprot.org/uniprot/UGL_BACGL UGL_BACGL] Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha-keto acid.<ref>PMID:10441389</ref> <ref>PMID:21147778</ref>
==Reference==
== Evolutionary Conservation ==
<ref group="xtra">PMID:016893885</ref><references group="xtra"/>
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Bacillus sp. gl1]]
Check<jmol>
[[Category: Hashimoto, W.]]
  <jmolCheckbox>
[[Category: Itoh, T.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d5j_consurf.spt"</scriptWhenChecked>
[[Category: Mikami, B.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Murata, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Alpha/alpha barrel]]
  </jmolCheckbox>
[[Category: Hydrolase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d5j ConSurf].
[[Category: Unsaturated glucuronyl hydrolase]]
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bacillus sp. GL1]]
[[Category: Large Structures]]
[[Category: Hashimoto W]]
[[Category: Itoh T]]
[[Category: Mikami B]]
[[Category: Murata K]]
Retrieved from "https://proteopedia.org/2d5j"