2deh: Difference between revisions

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[[Image:2deh.png|left|200px]]


{{STRUCTURE_2deh|  PDB=2deh  |  SCENE=  }}
==Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions==
 
<StructureSection load='2deh' size='340' side='right'caption='[[2deh]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
===Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2deh]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DEH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DEH FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[2deh]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DEH OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2deh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2deh OCA], [https://pdbe.org/2deh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2deh RCSB], [https://www.ebi.ac.uk/pdbsum/2deh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2deh ProSAT], [https://www.topsan.org/Proteins/RSGI/2deh TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q72IR6_THET2 Q72IR6_THET2]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/2deh_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2deh ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Inagaki, E.]]
[[Category: Inagaki E]]
[[Category: Nakano, N.]]
[[Category: Nakano N]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Shinkai A]]
[[Category: Shinkai, A.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Chloride ion]]
[[Category: Dodecamer]]
[[Category: Flavin]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]