2epi: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2epi.png|left|200px]]


{{STRUCTURE_2epi|  PDB=2epi  |  SCENE=  }}
==Crystal Structure pf hypothetical protein MJ1052 from Methanocaldococcus jannascii (Form 2)==
 
<StructureSection load='2epi' size='340' side='right'caption='[[2epi]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
===Crystal Structure pf hypothetical protein MJ1052 from Methanocaldococcus jannascii (Form 2)===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2epi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EPI FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2epi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2epi OCA], [https://pdbe.org/2epi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2epi RCSB], [https://www.ebi.ac.uk/pdbsum/2epi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2epi ProSAT], [https://www.topsan.org/Proteins/RSGI/2epi TOPSAN]</span></td></tr>
[[2epi]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPI OCA].  
</table>
[[Category: Methanocaldococcus jannaschii]]
== Function ==
[[Category: Kunishima, N.]]
[https://www.uniprot.org/uniprot/Y1052_METJA Y1052_METJA]  
[[Category: Mizutani, H.]]
== Evolutionary Conservation ==
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: National project on protein structural and functional analyse]]
Check<jmol>
[[Category: Nppsfa]]
  <jmolCheckbox>
[[Category: Riken structural genomics/proteomics initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/2epi_consurf.spt"</scriptWhenChecked>
[[Category: Rsgi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Structural genomic]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Unknown function]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2epi ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii DSM 2661]]
[[Category: Kunishima N]]
[[Category: Mizutani H]]