1v6z: Difference between revisions

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[[Image:1v6z.jpg|left|200px]]<br /><applet load="1v6z" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1v6z, resolution 2.00&Aring;" />
'''Crystal structure of TT1573 from Thermus thermophilus'''<br />


==About this Structure==
==Crystal structure of TT1573 from Thermus thermophilus==
1V6Z is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6Z OCA].  
<StructureSection load='1v6z' size='340' side='right'caption='[[1v6z]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Thermus thermophilus]]
<table><tr><td colspan='2'>[[1v6z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V6Z FirstGlance]. <br>
[[Category: Murayama, K.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Shirouzu, M.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v6z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v6z OCA], [https://pdbe.org/1v6z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v6z RCSB], [https://www.ebi.ac.uk/pdbsum/1v6z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v6z ProSAT], [https://www.topsan.org/Proteins/RSGI/1v6z TOPSAN]</span></td></tr>
[[Category: Yokoyama, S.]]
</table>
[[Category: riken structural genomics/proteomics initiative]]
== Function ==
[[Category: rsgi]]
[https://www.uniprot.org/uniprot/Q5SKI6_THET8 Q5SKI6_THET8] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity).[PIRNR:PIRNR015601]
[[Category: structural genomics]]
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:32:15 2008''
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v6/1v6z_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v6z ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Murayama K]]
[[Category: Shirouzu M]]
[[Category: Yokoyama S]]
Retrieved from "https://proteopedia.org/1v6z"