2duk: Difference between revisions

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[[Image:2duk.png|left|200px]]


{{STRUCTURE_2duk|  PDB=2duk  |  SCENE=  }}
==Crystal structure of MS0616==
 
<StructureSection load='2duk' size='340' side='right'caption='[[2duk]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
===Crystal structure of MS0616===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2duk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DUK FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.62&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2duk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2duk OCA], [https://pdbe.org/2duk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2duk RCSB], [https://www.ebi.ac.uk/pdbsum/2duk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2duk ProSAT], [https://www.topsan.org/Proteins/RSGI/2duk TOPSAN]</span></td></tr>
[[2duk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUK OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/NUDT4_MOUSE NUDT4_MOUSE] Cleaves a beta-phosphate from the diphosphate groups in PP-InsP5 (diphosphoinositol pentakisphosphate), PP-InsP4 and [PP]2-InsP4 (bisdiphosphoinositol tetrakisphosphate), suggesting that it may play a role in signal transduction. Also able to catalyze the hydrolysis of dinucleoside oligophosphate Ap6A, but not Ap5A. The major reaction products are ADP and p4a from Ap6A. Also able to hydrolyze 5-phosphoribose 1-diphosphate (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/2duk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2duk ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Hosaka, T.]]
[[Category: Hosaka T]]
[[Category: Kishishita, S.]]
[[Category: Kishishita S]]
[[Category: Murayama, K.]]
[[Category: Murayama K]]
[[Category: Nishino, A.]]
[[Category: Nishino A]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Shirouzu M]]
[[Category: Shirouzu, M.]]
[[Category: Uchikubo K-T]]
[[Category: Uchikubo, K T.]]
[[Category: Hydrolase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
Retrieved from "https://proteopedia.org/2duk"