2ekd: Difference between revisions

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[[Image:2ekd.png|left|200px]]


{{STRUCTURE_2ekd|  PDB=2ekd  |  SCENE=  }}
==Structural study of Project ID PH0250 from Pyrococcus horikoshii OT3==
 
<StructureSection load='2ekd' size='340' side='right'caption='[[2ekd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
===Structural study of Project ID PH0250 from Pyrococcus horikoshii OT3===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2ekd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EKD FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2ekd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKD OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ekd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ekd OCA], [https://pdbe.org/2ekd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ekd RCSB], [https://www.ebi.ac.uk/pdbsum/2ekd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ekd ProSAT], [https://www.topsan.org/Proteins/RSGI/2ekd TOPSAN]</span></td></tr>
[[Category: Pyrococcus horikoshii]]
</table>
[[Category: Asada, Y.]]
== Evolutionary Conservation ==
[[Category: Kunishima, N.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
Check<jmol>
[[Category: National project on protein structural and functional analyse]]
  <jmolCheckbox>
[[Category: Nppsfa]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ekd_consurf.spt"</scriptWhenChecked>
[[Category: Riken structural genomics/proteomics initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Rsgi]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Structural genomic]]
  </jmolCheckbox>
[[Category: Unknown function]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ekd ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Asada Y]]
[[Category: Kunishima N]]

Latest revision as of 00:53, 21 November 2024

Structural study of Project ID PH0250 from Pyrococcus horikoshii OT3

2ekd, resolution 2.30Å

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