2gp1: Difference between revisions
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==Bacteriophage HK97 Prohead II crystal structure== | |||
<SX load='2gp1' size='340' side='right' viewer='molstar' caption='[[2gp1]], [[Resolution|resolution]] 5.20Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2gp1]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_HK97 Escherichia virus HK97]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GP1 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 5.2Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gp1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gp1 OCA], [https://pdbe.org/2gp1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gp1 RCSB], [https://www.ebi.ac.uk/pdbsum/2gp1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gp1 ProSAT]</span></td></tr> | |||
== | </table> | ||
[[2gp1]] is a 7 chain structure with sequence from [ | == Function == | ||
[https://www.uniprot.org/uniprot/CAPSD_BPHK7 CAPSD_BPHK7] Assembles to form an icosahedral capsid of 66 nm, with a T=7 laevo symmetry (PubMed:11000116, PubMed:21276801). Responsible for its self-assembly into a procapsid. The phage does not need to encode a separate scaffolfing protein because its capsid protein contains the delta domain that carries that function.<ref>PMID:11000116</ref> <ref>PMID:21276801</ref> <ref>PMID:7669350</ref> <ref>PMID:7723020</ref> | |||
== | == Evolutionary Conservation == | ||
< | [[Image:Consurf_key_small.gif|200px|right]] | ||
[[ | Check<jmol> | ||
[[Category: | <jmolCheckbox> | ||
[[Category: | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/2gp1_consurf.spt"</scriptWhenChecked> | ||
[[Category: | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
[[Category: | <text>to colour the structure by Evolutionary Conservation</text> | ||
[[Category: | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gp1 ConSurf]. | |||
<div style="clear:both"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</SX> | |||
[[Category: Escherichia virus HK97]] | |||
[[Category: Large Structures]] | |||
[[Category: Gan L]] | |||
[[Category: Gertsman I]] | |||
[[Category: Johnson JE]] | |||
Latest revision as of 14:54, 20 September 2023
Bacteriophage HK97 Prohead II crystal structure
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