2k50: Difference between revisions

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[[Image:2k50.png|left|200px]]


{{STRUCTURE_2k50|  PDB=2k50  |  SCENE=  }}
==Solution NMR Structure of the replication Factor A Related Protein from Methanobacterium thermoautotrophicum. Northeast Structural Genomics Target TR91A.==
 
<StructureSection load='2k50' size='340' side='right'caption='[[2k50]]' scene=''>
===Solution NMR Structure of the replication Factor A Related Protein from Methanobacterium thermoautotrophicum. Northeast Structural Genomics Target TR91A.===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2k50]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K50 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k50 OCA], [https://pdbe.org/2k50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k50 RCSB], [https://www.ebi.ac.uk/pdbsum/2k50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k50 ProSAT], [https://www.topsan.org/Proteins/NESGC/2k50 TOPSAN]</span></td></tr>
[[2k50]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._delta_h Methanothermobacter thermautotrophicus str. delta h]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K50 OCA].  
</table>
[[Category: Methanothermobacter thermautotrophicus str. delta h]]
== Function ==
[[Category: Acton, T B.]]
[https://www.uniprot.org/uniprot/RPA_METTH RPA_METTH] Inhibits DNA polymerase activity of PolB, which can be overcome by RFC and PNCA. Stimulates 3'-to 5'-exonuclease activity of PolB at 30 degrees Celsius, but has no effect at 50 or 70 degrees Celsius. Bind ssDNA and replication forks; replication forks structures bind both Hel308 and this protein. Has no effect on helicase activity of Hel308; may help target the helicase to DNA substrates that require DNA re-modeling.<ref>PMID:10497247</ref> <ref>PMID:21195035</ref>
[[Category: Ciccosanti, C.]]
== Evolutionary Conservation ==
[[Category: Everett, J K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Foote, E L.]]
Check<jmol>
[[Category: Jiang, M.]]
  <jmolCheckbox>
[[Category: Maglaqui, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k50_consurf.spt"</scriptWhenChecked>
[[Category: Montelione, G T.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nair, R.]]
  </jmolCheckbox>
[[Category: Rossi, P.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k50 ConSurf].
[[Category: Rost, B.]]
<div style="clear:both"></div>
[[Category: Swapna, G.]]
== References ==
[[Category: Xiao, R.]]
<references/>
[[Category: Nesg]]
__TOC__
[[Category: Northeast structural genomics consortium]]
</StructureSection>
[[Category: Protein structure initiative]]
[[Category: Large Structures]]
[[Category: Psi-2]]
[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
[[Category: Structural genomic]]
[[Category: Acton TB]]
[[Category: Uncharacterized protein]]
[[Category: Ciccosanti C]]
[[Category: Unknown function]]
[[Category: Everett JK]]
[[Category: Foote EL]]
[[Category: Jiang M]]
[[Category: Maglaqui M]]
[[Category: Montelione GT]]
[[Category: Nair R]]
[[Category: Rossi P]]
[[Category: Rost B]]
[[Category: Swapna G]]
[[Category: Xiao R]]