2otn: Difference between revisions

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[[Image:2otn.png|left|200px]]


{{STRUCTURE_2otn|  PDB=2otn  |  SCENE=  }}
==Crystal structure of the catalytically active form of diaminopimelate epimerase from Bacillus anthracis==
 
<StructureSection load='2otn' size='340' side='right'caption='[[2otn]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
===Crystal structure of the catalytically active form of diaminopimelate epimerase from Bacillus anthracis===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2otn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._Ames Bacillus anthracis str. Ames]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OTN FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2otn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2otn OCA], [https://pdbe.org/2otn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2otn RCSB], [https://www.ebi.ac.uk/pdbsum/2otn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2otn ProSAT]</span></td></tr>
[[2otn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._ames Bacillus anthracis str. ames]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTN OCA].  
</table>
[[Category: Bacillus anthracis str. ames]]
== Function ==
[[Category: Diaminopimelate epimerase]]
[https://www.uniprot.org/uniprot/DAPF_BACAN DAPF_BACAN] Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (By similarity).[HAMAP-Rule:MF_00197]
[[Category: Fukuda, K.]]
== Evolutionary Conservation ==
[[Category: Jaroszewski, L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Liddington, R C.]]
Check<jmol>
[[Category: Matho, M H.]]
  <jmolCheckbox>
[[Category: Roper, D.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2otn_consurf.spt"</scriptWhenChecked>
[[Category: Santelli, E.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacillus anthracis diaminopimelate epimerase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Dap]]
  </jmolCheckbox>
[[Category: Isomerase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2otn ConSurf].
[[Category: Lanthionine]]
<div style="clear:both"></div>
[[Category: Lysine metabolism]]
__TOC__
</StructureSection>
[[Category: Bacillus anthracis str. Ames]]
[[Category: Large Structures]]
[[Category: Fukuda K]]
[[Category: Jaroszewski L]]
[[Category: Liddington RC]]
[[Category: Matho MH]]
[[Category: Roper D]]
[[Category: Santelli E]]

Latest revision as of 10:48, 30 August 2023

Crystal structure of the catalytically active form of diaminopimelate epimerase from Bacillus anthracis

2otn, resolution 2.40Å

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