2o34: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
m Protected "2o34" [edit=sysop:move=sysop]
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2o34.png|left|200px]]


{{STRUCTURE_2o34|  PDB=2o34  |  SCENE=  }}
==Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375==
 
<StructureSection load='2o34' size='340' side='right'caption='[[2o34]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
===Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375===
== Structural highlights ==
 
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O34 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O34 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[2o34]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O34 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o34 OCA], [https://pdbe.org/2o34 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o34 RCSB], [https://www.ebi.ac.uk/pdbsum/2o34 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o34 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2o34 TOPSAN]</span></td></tr>
[[Category: Desulfovibrio vulgaris]]
</table>
[[Category: Adams, J M.]]
== Evolutionary Conservation ==
[[Category: Almo, S C.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Atwell, S.]]
Check<jmol>
[[Category: Bain, K T.]]
  <jmolCheckbox>
[[Category: Boice, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o34_consurf.spt"</scriptWhenChecked>
[[Category: Burley, S K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Dickey, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Emtage, S.]]
  </jmolCheckbox>
[[Category: Gheyi, T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o34 ConSurf].
[[Category: Groshong, C.]]
<div style="clear:both"></div>
[[Category: Malashkevich, V N.]]
__TOC__
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</StructureSection>
[[Category: Ozyurt, S.]]
[[Category: Large Structures]]
[[Category: Powell, A.]]
[[Category: Adams JM]]
[[Category: Reyes, C.]]
[[Category: Almo SC]]
[[Category: Rooney, I.]]
[[Category: Atwell S]]
[[Category: Rutter, M E.]]
[[Category: Bain KT]]
[[Category: Sauder, J M.]]
[[Category: Boice A]]
[[Category: Schwinn, K D.]]
[[Category: Burley SK]]
[[Category: Thompson, D A.]]
[[Category: Dickey M]]
[[Category: Toro, R.]]
[[Category: Emtage S]]
[[Category: Wasserman, S R.]]
[[Category: Gheyi T]]
[[Category: Hypothetical protein]]
[[Category: Groshong C]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Malashkevich VN]]
[[Category: Nysgxrc]]
[[Category: Ozyurt S]]
[[Category: Protein structure initiative]]
[[Category: Powell A]]
[[Category: Psi]]
[[Category: Reyes C]]
[[Category: Structural genomic]]
[[Category: Rooney I]]
[[Category: Unknown function]]
[[Category: Rutter ME]]
[[Category: Sauder JM]]
[[Category: Schwinn KD]]
[[Category: Thompson DA]]
[[Category: Toro R]]
[[Category: Wasserman SR]]
Retrieved from "https://proteopedia.org/2o34"