2i6v: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==PDZ domain of EpsC from Vibrio cholerae, residues 219-305== | |||
<StructureSection load='2i6v' size='340' side='right'caption='[[2i6v]], [[Resolution|resolution]] 1.63Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2i6v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I6V FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6v OCA], [https://pdbe.org/2i6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i6v RCSB], [https://www.ebi.ac.uk/pdbsum/2i6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i6v ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/GSPC_VIBCH GSPC_VIBCH] Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6v_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i6v ConSurf]. | |||
<div style="clear:both"></div> | |||
=== | ==See Also== | ||
*[[General secretion pathway protein 3D structures|General secretion pathway protein 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
< | |||
[[Category: Vibrio cholerae]] | [[Category: Vibrio cholerae]] | ||
[[Category: Bagdasarian | [[Category: Bagdasarian M]] | ||
[[Category: Hol | [[Category: Hol WGJ]] | ||
[[Category: Korotkov | [[Category: Korotkov KV]] | ||
[[Category: Krumm | [[Category: Krumm B]] | ||
Latest revision as of 09:01, 21 February 2024
PDZ domain of EpsC from Vibrio cholerae, residues 219-305
| ||||||||||||
