2pma: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
m Protected "2pma" [edit=sysop:move=sysop]
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pma.png|left|200px]]


{{STRUCTURE_2pma|  PDB=2pma  |  SCENE=  }}
==Structural Genomics, the crystal structure of a protein Lpg0085 with unknown function (DUF785) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1.==
 
<StructureSection load='2pma' size='340' side='right'caption='[[2pma]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
===Structural Genomics, the crystal structure of a protein Lpg0085 with unknown function (DUF785) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1.===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2pma]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PMA FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
[[2pma]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._philadelphia_1 Legionella pneumophila subsp. pneumophila str. philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMA OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pma OCA], [https://pdbe.org/2pma PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pma RCSB], [https://www.ebi.ac.uk/pdbsum/2pma PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pma ProSAT], [https://www.topsan.org/Proteins/MCSG/2pma TOPSAN]</span></td></tr>
[[Category: Legionella pneumophila subsp. pneumophila str. philadelphia 1]]
</table>
[[Category: Joachimiak, A.]]
== Function ==
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[https://www.uniprot.org/uniprot/Q5ZZC6_LEGPH Q5ZZC6_LEGPH]  
[[Category: Moy, S.]]
== Evolutionary Conservation ==
[[Category: Mulligan, R.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Tan, K.]]
Check<jmol>
[[Category: Apc86035 2]]
  <jmolCheckbox>
[[Category: Duf785]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pma_consurf.spt"</scriptWhenChecked>
[[Category: Legionella pneumophila subsp. pneumophila str. philadelphia 1]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Mcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Midwest center for structural genomic]]
  </jmolCheckbox>
[[Category: Protein lpg0085]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pma ConSurf].
[[Category: Protein structure initiative]]
<div style="clear:both"></div>
[[Category: Psi-2]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Unknown function]]
[[Category: Large Structures]]
[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]]
[[Category: Joachimiak A]]
[[Category: Moy S]]
[[Category: Mulligan R]]
[[Category: Tan K]]
Retrieved from "https://proteopedia.org/2pma"