3cjw: Difference between revisions

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[[Image:3cjw.png|left|200px]]


{{STRUCTURE_3cjw|  PDB=3cjw  |  SCENE=  }}
==Crystal structure of the human COUP-TFII ligand binding domain==
 
<StructureSection load='3cjw' size='340' side='right'caption='[[3cjw]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
===Crystal structure of the human COUP-TFII ligand binding domain===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3cjw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJW FirstGlance]. <br>
{{ABSTRACT_PUBMED_18798693}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjw OCA], [https://pdbe.org/3cjw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjw RCSB], [https://www.ebi.ac.uk/pdbsum/3cjw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjw ProSAT]</span></td></tr>
==About this Structure==
</table>
[[3cjw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJW OCA].  
== Function ==
 
[https://www.uniprot.org/uniprot/COT2_HUMAN COT2_HUMAN] Ligand-activated transcription factor. Activated by high concentrations of 9-cis-retinoic acid and all-trans-retinoic acid, but not by dexamethasone, cortisol or progesterone (in vitro). Regulation of the apolipoprotein A-I gene transcription. Binds to DNA site A.<ref>PMID:1899293</ref> <ref>PMID:9343308</ref> <ref>PMID:18798693</ref>
==Reference==
== Evolutionary Conservation ==
<ref group="xtra">PMID:018798693</ref><references group="xtra"/>
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjw_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjw ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Kruse, S W.]]
[[Category: Large Structures]]
[[Category: Reynolds, R.]]
[[Category: Kruse SW]]
[[Category: Vonrhein, C.]]
[[Category: Reynolds R]]
[[Category: Xu, H E.]]
[[Category: Vonrhein C]]
[[Category: Coup-tfii]]
[[Category: Xu HE]]
[[Category: Dna-binding]]
[[Category: Ligand binding domain]]
[[Category: Metal-binding]]
[[Category: Nuclear receptor]]
[[Category: Nucleus]]
[[Category: Orphan receptor]]
[[Category: Receptor]]
[[Category: Three-layered helical sandwich]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Zinc-finger]]
Retrieved from "https://proteopedia.org/3cjw"