3dje: Difference between revisions

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[[Image:3dje.png|left|200px]]


{{STRUCTURE_3dje|  PDB=3dje  |  SCENE=  }}
==Crystal structure of the deglycating enzyme fructosamine oxidase from Aspergillus fumigatus (Amadoriase II) in complex with FSA==
 
<StructureSection load='3dje' size='340' side='right'caption='[[3dje]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
===Crystal structure of the deglycating enzyme fructosamine oxidase from Aspergillus fumigatus (Amadoriase II) in complex with FSA===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dje]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_fumigatus Aspergillus fumigatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DJE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DJE FirstGlance]. <br>
{{ABSTRACT_PUBMED_018667417}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FSA:1-S-(CARBOXYMETHYL)-1-THIO-BETA-D-FRUCTOPYRANOSE'>FSA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dje FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dje OCA], [https://pdbe.org/3dje PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dje RCSB], [https://www.ebi.ac.uk/pdbsum/3dje PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dje ProSAT]</span></td></tr>
[[3dje]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_fumigatus Aspergillus fumigatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DJE OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/P78573_ASPFM P78573_ASPFM]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/3dje_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dje ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Aspergillus fumigatus]]
[[Category: Aspergillus fumigatus]]
[[Category: Collard, F.]]
[[Category: Large Structures]]
[[Category: Monnier, V M.]]
[[Category: Collard F]]
[[Category: Nemet, I.]]
[[Category: Monnier VM]]
[[Category: Qanungo, K R.]]
[[Category: Nemet I]]
[[Category: Yee, V C.]]
[[Category: Qanungo KR]]
[[Category: Zhang, J.]]
[[Category: Yee VC]]
[[Category: Amadoriase]]
[[Category: Zhang J]]
[[Category: Deglycation]]
[[Category: Fructosamine oxidase]]
[[Category: Fructosyl-amino acid]]
[[Category: Oxidoreductase]]
Retrieved from "https://proteopedia.org/3dje"