3cmg: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "3cmg" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3cmg.png|left|200px]]


{{STRUCTURE_3cmg|  PDB=3cmg  |  SCENE=  }}
==Crystal structure of putative beta-galactosidase from Bacteroides fragilis==
 
<StructureSection load='3cmg' size='340' side='right'caption='[[3cmg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===Crystal structure of putative beta-galactosidase from Bacteroides fragilis===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3cmg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CMG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CMG FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[3cmg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CMG OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cmg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cmg OCA], [https://pdbe.org/3cmg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cmg RCSB], [https://www.ebi.ac.uk/pdbsum/3cmg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cmg ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cmg TOPSAN]</span></td></tr>
[[Category: Bacteroides fragilis nctc 9343]]
</table>
[[Category: Almo, S C.]]
== Function ==
[[Category: Burley, S K.]]
[https://www.uniprot.org/uniprot/Q5LIC7_BACFN Q5LIC7_BACFN]  
[[Category: Gheyi, T.]]
== Evolutionary Conservation ==
[[Category: Hu, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Maletic, M.]]
Check<jmol>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  <jmolCheckbox>
[[Category: Ramagopal, U A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/3cmg_consurf.spt"</scriptWhenChecked>
[[Category: Rutter, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sauder, J M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Toro, R.]]
  </jmolCheckbox>
[[Category: Hydrolase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cmg ConSurf].
[[Category: New york sgx research center for structural genomic]]
<div style="clear:both"></div>
[[Category: Nysgxrc]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi-2]]
[[Category: Bacteroides fragilis NCTC 9343]]
[[Category: Putative beta-galactosidase]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Gheyi T]]
[[Category: Hu S]]
[[Category: Maletic M]]
[[Category: Ramagopal UA]]
[[Category: Rutter M]]
[[Category: Sauder JM]]
[[Category: Toro R]]