3a09: Difference between revisions

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[[Image:3a09.png|left|200px]]


{{STRUCTURE_3a09|  PDB=3a09  |  SCENE=  }}
==Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate==
 
<StructureSection load='3a09' size='340' side='right'caption='[[3a09]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
===Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3a09]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_sp._A1 Sphingomonas sp. A1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A09 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A09 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEM:BETA-D-MANNURONIC+ACID'>BEM</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAV:ALPHA-D-MANNOPYRANURONIC+ACID'>MAV</scene>, <scene name='pdbligand=MAW:4-DEOXY-ALPHA-L-ERYTHRO-HEX-4-ENOPYRANURONIC+ACID'>MAW</scene></td></tr>
[[3a09]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingomonas Sphingomonas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A09 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a09 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a09 OCA], [https://pdbe.org/3a09 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a09 RCSB], [https://www.ebi.ac.uk/pdbsum/3a09 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a09 ProSAT]</span></td></tr>
[[Category: Sphingomonas]]
</table>
[[Category: Hashimoto, W.]]
== Function ==
[[Category: Itoh, T.]]
[https://www.uniprot.org/uniprot/Q9KWT6_SPHSX Q9KWT6_SPHSX]
[[Category: Mikami, B.]]
== Evolutionary Conservation ==
[[Category: Murata, K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Alginate]]
Check<jmol>
[[Category: Sugar binding protein]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/3a09_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a09 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Sphingomonas sp. A1]]
[[Category: Hashimoto W]]
[[Category: Itoh T]]
[[Category: Mikami B]]
[[Category: Murata K]]
Retrieved from "https://proteopedia.org/3a09"