2q18: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2q18.png|left|200px]]


{{STRUCTURE_2q18|  PDB=2q18  |  SCENE=  }}
==2-keto-3-deoxy-D-arabinonate dehydratase==
 
<StructureSection load='2q18' size='340' side='right'caption='[[2q18]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
===2-keto-3-deoxy-D-arabinonate dehydratase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2q18]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q18 FirstGlance]. <br>
{{ABSTRACT_PUBMED_18448118}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q18 OCA], [https://pdbe.org/2q18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q18 RCSB], [https://www.ebi.ac.uk/pdbsum/2q18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q18 ProSAT]</span></td></tr>
[[2q18]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q18 OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/KDAD_SACS2 KDAD_SACS2] Participates in a pentose oxidation pathway that converts D-arabinonate to 2-oxoglutarate.<ref>PMID:16849334</ref>  
<ref group="xtra">PMID:018448118</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Category: Sulfolobus solfataricus]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Akerboom, J]]
Check<jmol>
[[Category: Barends, T.]]
  <jmolCheckbox>
[[Category: Brouns, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/2q18_consurf.spt"</scriptWhenChecked>
[[Category: Salmon, L.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Turnbull, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Worm, P.]]
  </jmolCheckbox>
[[Category: Fah-family fold]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2q18 ConSurf].
[[Category: Lyase]]
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharolobus solfataricus P2]]
[[Category: Akerboom J]]
[[Category: Barends T]]
[[Category: Brouns S]]
[[Category: Salmon L]]
[[Category: Turnbull A]]
[[Category: Worm P]]
Retrieved from "https://proteopedia.org/2q18"