1y0e: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(16 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1y0e.jpg|left|200px]]<br /><applet load="1y0e" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1y0e, resolution 1.95&Aring;" />
'''Crystal structure of putative ManNAc-6-P epimerase from Staphylococcus aureus (strain N315)'''<br />


==About this Structure==
==Crystal structure of putative ManNAc-6-P epimerase from Staphylococcus aureus (strain N315)==
1Y0E is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/N-acylglucosamine-6-phosphate_2-epimerase N-acylglucosamine-6-phosphate 2-epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.9 5.1.3.9] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0E OCA].  
<StructureSection load='1y0e' size='340' side='right'caption='[[1y0e]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
[[Category: N-acylglucosamine-6-phosphate 2-epimerase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1y0e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_N315 Staphylococcus aureus subsp. aureus N315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y0E FirstGlance]. <br>
[[Category: Staphylococcus aureus]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
[[Category: Chang, C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y0e OCA], [https://pdbe.org/1y0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y0e RCSB], [https://www.ebi.ac.uk/pdbsum/1y0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y0e ProSAT], [https://www.topsan.org/Proteins/MCSG/1y0e TOPSAN]</span></td></tr>
[[Category: Li, H.]]
</table>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
== Function ==
[[Category: PO4]]
[https://www.uniprot.org/uniprot/NANE_STAAN NANE_STAAN] Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential).
[[Category: mannac-6-p epimerase]]
== Evolutionary Conservation ==
[[Category: mcsg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: midwest center for structural genomics]]
Check<jmol>
[[Category: nane]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y0/1y0e_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:00:32 2008''
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y0e ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Staphylococcus aureus subsp. aureus N315]]
[[Category: Chang C]]
[[Category: Joachimiak A]]
[[Category: Li H]]