3dfz: Difference between revisions

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[[Image:3dfz.png|left|200px]]


{{STRUCTURE_3dfz|  PDB=3dfz  |  SCENE=  }}
==SirC, precorrin-2 dehydrogenase==
 
<StructureSection load='3dfz' size='340' side='right'caption='[[3dfz]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
===SirC, precorrin-2 dehydrogenase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dfz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Priestia_megaterium Priestia megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DFZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DFZ FirstGlance]. <br>
{{ABSTRACT_PUBMED_18588505}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dfz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dfz OCA], [https://pdbe.org/3dfz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dfz RCSB], [https://www.ebi.ac.uk/pdbsum/3dfz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dfz ProSAT]</span></td></tr>
[[3dfz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_megaterium Bacillus megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DFZ OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/SIRC_PRIMG SIRC_PRIMG] Catalyzes the dehydrogenation of precorrin-2 to form sirohydrochlorin which is used as a precursor in both siroheme biosynthesis and in the anaerobic branch of adenosylcobalamin biosynthesis. It is unable to oxidize precorrin-3.<ref>PMID:12408752</ref> <ref>PMID:18588505</ref>
<ref group="xtra">PMID:018588505</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Category: Bacillus megaterium]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Precorrin-2 dehydrogenase]]
Check<jmol>
[[Category: Hill, C P.]]
  <jmolCheckbox>
[[Category: Schubert, H L.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3dfz_consurf.spt"</scriptWhenChecked>
[[Category: Warren, M J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Cobalamin biosynthesis]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nad]]
  </jmolCheckbox>
[[Category: Nad dehydrogenase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dfz ConSurf].
[[Category: Oxidoreductase]]
<div style="clear:both"></div>
[[Category: Porphyrin biosynthesis]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Priestia megaterium]]
[[Category: Hill CP]]
[[Category: Schubert HL]]
[[Category: Warren MJ]]
Retrieved from "https://proteopedia.org/3dfz"