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[[Image:1y7b.gif|left|200px]]<br /><applet load="1y7b" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1y7b, resolution 1.60&Aring;" />
'''BETA-D-XYLOSIDASE, A FAMILY 43 GLYCOSIDE HYDROLASE'''<br />


==About this Structure==
==BETA-D-XYLOSIDASE, A FAMILY 43 GLYCOSIDE HYDROLASE==
1Y7B is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum_atcc_824 Clostridium acetobutylicum atcc 824] with <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=EPE:'>EPE</scene>, <scene name='pdbligand=PGE:'>PGE</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Xylan_1,4-beta-xylosidase Xylan 1,4-beta-xylosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.37 3.2.1.37] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y7B OCA].
<StructureSection load='1y7b' size='340' side='right'caption='[[1y7b]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
[[Category: Clostridium acetobutylicum atcc 824]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1y7b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum_ATCC_824 Clostridium acetobutylicum ATCC 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y7B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y7B FirstGlance]. <br>
[[Category: Xylan 1,4-beta-xylosidase]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
[[Category: Almo, S C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Burley, S K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y7b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y7b OCA], [https://pdbe.org/1y7b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y7b RCSB], [https://www.ebi.ac.uk/pdbsum/1y7b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y7b ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1y7b TOPSAN]</span></td></tr>
[[Category: Fedorov, E.]]
</table>
[[Category: Gilliland, G L.]]
== Function ==
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[https://www.uniprot.org/uniprot/Q97DM1_CLOAB Q97DM1_CLOAB]  
[[Category: Teplyakov, A.]]
== Evolutionary Conservation ==
[[Category: CA]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: EPE]]
Check<jmol>
[[Category: GOL]]
  <jmolCheckbox>
[[Category: PGE]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y7/1y7b_consurf.spt"</scriptWhenChecked>
[[Category: SO4]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: beta-propeller]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: beta-sandwich]]
  </jmolCheckbox>
[[Category: new york structural genomix research consortium]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y7b ConSurf].
[[Category: nysgxrc]]
<div style="clear:both"></div>
[[Category: protein structure initative]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:02:23 2008''
==See Also==
*[[Xylosidase 3D structures|Xylosidase 3D structures]]
__TOC__
</StructureSection>
[[Category: Clostridium acetobutylicum ATCC 824]]
[[Category: Large Structures]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Fedorov E]]
[[Category: Gilliland GL]]
[[Category: Teplyakov A]]

Latest revision as of 08:55, 14 February 2024

BETA-D-XYLOSIDASE, A FAMILY 43 GLYCOSIDE HYDROLASE

1y7b, resolution 1.60Å

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