2qmm: Difference between revisions

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[[Image:2qmm.png|left|200px]]


{{STRUCTURE_2qmm|  PDB=2qmm  |  SCENE=  }}
==Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)==
 
<StructureSection load='2qmm' size='340' side='right'caption='[[2qmm]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
===Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2qmm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QMM FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
[[2qmm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_dsm_4304 Archaeoglobus fulgidus dsm 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmm OCA], [https://pdbe.org/2qmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qmm RCSB], [https://www.ebi.ac.uk/pdbsum/2qmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qmm ProSAT], [https://www.topsan.org/Proteins/MCSG/2qmm TOPSAN]</span></td></tr>
[[Category: Archaeoglobus fulgidus dsm 4304]]
</table>
[[Category: Duke, N.]]
== Function ==
[[Category: Gu, M.]]
[https://www.uniprot.org/uniprot/TRMY_ARCFU TRMY_ARCFU] Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs.
[[Category: Joachimiak, A.]]
== Evolutionary Conservation ==
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Zhou, M.]]
Check<jmol>
[[Category: Alpha/beta knot]]
  <jmolCheckbox>
[[Category: Mcsg]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qmm_consurf.spt"</scriptWhenChecked>
[[Category: Midwest center for structural genomic]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Psi-2]]
  </jmolCheckbox>
[[Category: Sam]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qmm ConSurf].
[[Category: Structural genomic]]
<div style="clear:both"></div>
[[Category: Unknown function]]
__TOC__
</StructureSection>
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Large Structures]]
[[Category: Duke N]]
[[Category: Gu M]]
[[Category: Joachimiak A]]
[[Category: Zhou M]]
Retrieved from "https://proteopedia.org/2qmm"