1yd7: Difference between revisions

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[[Image:1yd7.gif|left|200px]]<br /><applet load="1yd7" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1yd7, resolution 2.30&Aring;" />
'''Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus'''<br />


==About this Structure==
==Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus==
1YD7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] with <scene name='pdbligand=UNX:'>UNX</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA].  
<StructureSection load='1yd7' size='340' side='right'caption='[[1yd7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD7 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [https://pdbe.org/1yd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1yd7 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8U046_PYRFU Q8U046_PYRFU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yd7 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
[[Category: Single protein]]
[[Category: Adams MWW]]
[[Category: Adams, M W.W.]]
[[Category: Chang J]]
[[Category: Chang, J.]]
[[Category: Chang S-H]]
[[Category: Chang, S H.]]
[[Category: Chen L]]
[[Category: Chen, L.]]
[[Category: Florence Q]]
[[Category: Florence, Q.]]
[[Category: Habel J]]
[[Category: Habel, J.]]
[[Category: Horanyi P]]
[[Category: Horanyi, P.]]
[[Category: Jenney Jr FE]]
[[Category: Jr., F E.Jenney.]]
[[Category: Lee D]]
[[Category: Lee, D.]]
[[Category: Lin D]]
[[Category: Lin, D.]]
[[Category: Liu Z-J]]
[[Category: Liu, Z J.]]
[[Category: Nguyen D]]
[[Category: Nguyen, D.]]
[[Category: Praissman J]]
[[Category: Praissman, J.]]
[[Category: Rose JP]]
[[Category: Rose, J P.]]
[[Category: Tempel W]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Wang B-C]]
[[Category: Tempel, W.]]
[[Category: Xu H]]
[[Category: Wang, B C.]]
[[Category: Zhang H]]
[[Category: Xu, H.]]
[[Category: Zhao M]]
[[Category: Zhang, H.]]
[[Category: Zhou W]]
[[Category: Zhao, M.]]
[[Category: Zhou, W.]]
[[Category: UNX]]
[[Category: conserved hypothetical protein]]
[[Category: hyperthermophile]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: pyrococcus furiosus]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomics]]
[[Category: structural genomics]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:04:07 2008''

Latest revision as of 00:41, 21 November 2024

Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus

1yd7, resolution 2.30Å

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