1ydm: Difference between revisions
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== | ==X-Ray structure of Northeast Structural Genomics target SR44== | ||
<StructureSection load='1ydm' size='340' side='right'caption='[[1ydm]], [[Resolution|resolution]] 2.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1ydm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YDM FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ydm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydm OCA], [https://pdbe.org/1ydm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ydm RCSB], [https://www.ebi.ac.uk/pdbsum/1ydm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ydm ProSAT], [https://www.topsan.org/Proteins/NESGC/1ydm TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/YQGN_BACSU YQGN_BACSU] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydm_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ydm ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Acton T]] | ||
[[Category: Hunt | [[Category: Hunt JF]] | ||
[[Category: Jianwei | [[Category: Jianwei S]] | ||
[[Category: Kuzin | [[Category: Kuzin AP]] | ||
[[Category: Ma | [[Category: Ma L-C]] | ||
[[Category: Montelione | [[Category: Montelione G]] | ||
[[Category: Tong L]] | |||
[[Category: Tong | [[Category: Vorobiev S]] | ||
[[Category: Vorobiev | [[Category: Xia R]] | ||
[[Category: Xia | |||
Latest revision as of 08:02, 15 May 2024
X-Ray structure of Northeast Structural Genomics target SR44
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