3dtg: Difference between revisions

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[[Image:3dtg.png|left|200px]]


{{STRUCTURE_3dtg|  PDB=3dtg  |  SCENE=  }}
==Structural analysis of mycobacterial branched chain aminotransferase- implications for inhibitor design==
 
<StructureSection load='3dtg' size='340' side='right'caption='[[3dtg]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===Structural analysis of mycobacterial branched chain aminotransferase- implications for inhibitor design===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dtg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis Mycolicibacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DTG FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OBZ:O-BENZYLHYDROXYLAMINE'>OBZ</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
[[3dtg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_smegmatis Mycobacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DTG OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dtg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dtg OCA], [https://pdbe.org/3dtg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dtg RCSB], [https://www.ebi.ac.uk/pdbsum/3dtg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dtg ProSAT]</span></td></tr>
[[Category: Branched-chain-amino-acid transaminase]]
</table>
[[Category: Mycobacterium smegmatis]]
== Function ==
[[Category: Castell, A.]]
[https://www.uniprot.org/uniprot/ILVE_MYCS2 ILVE_MYCS2] Catalyzes the reversible transfers of an amino group from glutamate to the alpha-ketoacid of the respective amino acid in the final step in the biosynthesis of branchedchain amino acids. The amino acids can be ranked in the following order with respect to their efficiency as amino donor: Leu > Ile > Val.<ref>PMID:20445230</ref>
[[Category: Unge, T.]]
== Evolutionary Conservation ==
[[Category: Aminotransferase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Open twisted alpha/beta]]
Check<jmol>
[[Category: Transferase]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/3dtg_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dtg ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mycolicibacterium smegmatis]]
[[Category: Castell A]]
[[Category: Unge T]]