1yx2: Difference between revisions

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[[Image:1yx2.gif|left|200px]]<br /><applet load="1yx2" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1yx2, resolution 2.08&Aring;" />
'''Crystal Structure of the Probable Aminomethyltransferase from Bacillus subtilis'''<br />


==About this Structure==
==Crystal Structure of the Probable Aminomethyltransferase from Bacillus subtilis==
1YX2 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Aminomethyltransferase Aminomethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.10 2.1.2.10] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YX2 OCA].  
<StructureSection load='1yx2' size='340' side='right'caption='[[1yx2]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
[[Category: Aminomethyltransferase]]
== Structural highlights ==
<table><tr><td colspan='2'>[[1yx2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YX2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YX2 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yx2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yx2 OCA], [https://pdbe.org/1yx2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yx2 RCSB], [https://www.ebi.ac.uk/pdbsum/1yx2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yx2 ProSAT], [https://www.topsan.org/Proteins/MCSG/1yx2 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GCST_BACSU GCST_BACSU] The glycine cleavage system catalyzes the degradation of glycine (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yx/1yx2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yx2 ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Aminomethyltransferase 3D structures|Aminomethyltransferase 3D structures]]
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: EDO]]
[[Category: alpha-beta]]
[[Category: aminomethyltransferase]]
[[Category: beta-barrel]]
[[Category: glycine cleavage system t protein]]
[[Category: mcsg]]
[[Category: midwest center for structural genomics]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:09:58 2008''
Retrieved from "https://proteopedia.org/1yx2"