1zgh: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1zgh.gif|left|200px]]<br /><applet load="1zgh" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1zgh, resolution 2.050&Aring;" />
'''Methionyl-tRNA formyltransferase from Clostridium thermocellum'''<br />


==About this Structure==
==Methionyl-tRNA formyltransferase from Clostridium thermocellum==
1ZGH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum_atcc_27405 Clostridium thermocellum atcc 27405] with <scene name='pdbligand=UNX:'>UNX</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. This structure supersedes the now removed PDB entry 1XG9. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA].  
<StructureSection load='1zgh' size='340' side='right'caption='[[1zgh]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
[[Category: Clostridium thermocellum atcc 27405]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1zgh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xg9 1xg9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZGH FirstGlance]. <br>
[[Category: Chang, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
[[Category: Chang, S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
[[Category: Chen, L.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zgh OCA], [https://pdbe.org/1zgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zgh RCSB], [https://www.ebi.ac.uk/pdbsum/1zgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zgh ProSAT], [https://www.topsan.org/Proteins/SECSG/1zgh TOPSAN]</span></td></tr>
[[Category: Habel, J.]]
</table>
[[Category: III, W B.Arendall.]]
== Function ==
[[Category: Kataeva, I.]]
[https://www.uniprot.org/uniprot/A3DHJ7_ACET2 A3DHJ7_ACET2]  
[[Category: Lee, D.]]
== Evolutionary Conservation ==
[[Category: Lin, D.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Liu, Z.]]
Check<jmol>
[[Category: Richardson, D C.]]
  <jmolCheckbox>
[[Category: Richardson, J S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zg/1zgh_consurf.spt"</scriptWhenChecked>
[[Category: Rose, J P.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Tempel, W.]]
  </jmolCheckbox>
[[Category: Wang, B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zgh ConSurf].
[[Category: Xu, H.]]
<div style="clear:both"></div>
[[Category: Yang, H.]]
__TOC__
[[Category: Zhao, M.]]
</StructureSection>
[[Category: Zhou, W.]]
[[Category: Acetivibrio thermocellus ATCC 27405]]
[[Category: UNX]]
[[Category: Large Structures]]
[[Category: clostridium thermocellum]]
[[Category: Arendall III WB]]
[[Category: methionyl-trna formyltransferase]]
[[Category: Chang J]]
[[Category: protein structure initiative]]
[[Category: Chang S]]
[[Category: psi]]
[[Category: Chen L]]
[[Category: secsg]]
[[Category: Habel J]]
[[Category: southeast collaboratory for structural genomics]]
[[Category: Kataeva I]]
 
[[Category: Lee D]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:15:16 2008''
[[Category: Lin D]]
[[Category: Liu Z]]
[[Category: Richardson DC]]
[[Category: Richardson JS]]
[[Category: Rose JP]]
[[Category: Tempel W]]
[[Category: Wang B]]
[[Category: Xu H]]
[[Category: Yang H]]
[[Category: Zhao M]]
[[Category: Zhou W]]