Group:MUZIC:Plectin: Difference between revisions

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<Structure load='1sh6' size='300' frame='true' align='right' caption='The actin binding domain of plectin (PDB:1SH6)' scene='User:Jae-Geun_Song/Workbench/plectin/Plecin_actin_binding_domain/1'/>
<StructureSection load='3pe0' size='450' side='right' scene='User:Jae-Geun_Song/Workbench/plectin/Plakin/1' caption='Human plectin plakin domain (PDB code [[3pe0]])'>


== Introduction ==
== Introduction ==
Plectin is a multidomain protein with large size (>500kDa) and versatile binding properties, which abundantly expressed in a wide variety of mammalian tissues and cell types, combined with different binding partners. It has important functions in maintaining the mechanical stability of skin, skeletal muscle and heart.
'''Plectin''' is a multidomain protein with large size (>500kDa) and versatile binding properties, which abundantly expressed in a wide variety of mammalian tissues and cell types, combined with different binding partners. It has important functions in maintaining the mechanical stability of skin, skeletal muscle and heart.


The plectin gene has unusual 5'-end diversity, which is alternatively spliced into exon 2 and makes 11 kinds of isoforms.
The plectin gene has unusual 5'-end diversity, which is alternatively spliced into exon 2 and makes 11 kinds of isoforms.
Expression level of isofroms is varied in tissues,and some of them are specifically expressed in brain,skeletal muscle and skin . <ref>PMID:10556294</ref>.
Expression level of isofroms is varied in tissues,and some of them are specifically expressed in brain (isoform 1c),skeletal muscle (isoform 1d) and skin(isoform 1a). <ref>PMID:10556294</ref>.


[[Image:isoforms.gif]]
[[Image:isoforms.gif]]


<Structure load='3PE0' size='300' frame='true' align='right' caption='Crystal structure of SR4-SR5-SH3 regions in the plakin domain (PDB:3PE0)' scene='User:Jae-Geun_Song/Workbench/plectin/Plakin/1'/>
== Sequence annotation ==
The isoform-1 of the human plectin contains 4,684 amino acids [http://www.uniprot.org/uniprot/Q15149 (uniprot:Q15149)]. Plectin can be divided in three main sections; a central coiled-coil rod domain(exon 31), N and C-terminal globular region and exhibits a dumbbell like structure <ref>PMID:8633055</ref>. C-terminal region (exon 32) is composed of 6 homologous repeating domains, and this region has a role in binding to intermediate filaments such as vimentin and cytokeratin <ref>PMID:3430617</ref>. N-terminal globular region contains actin binding domain comprising two calponin homology (exon 2-8) and <scene name='User:Jae-Geun_Song/Workbench/plectin/Plakin/1'>plakin domain</scene> (exon 9-30).


== Structures ==
[[Image:plectin.jpg|left|300px|thumb]]
Plectin can be divided in three main sections; a central coiled-coil rod domain, N and C-terminal globular region and exhibits a dumbbell like structure. C-terminal region is composed of 6 homologous repeating domains, and this region has a role in binding to intermediate filaments such as vimentin and cytokeratin <ref>PMID:3430617</ref>. N-terminal globular region contains actin binding domain (ABD) comprising two calponin homology.
 
[[Image:plectin.jpg]]


Schematic domain map of plectin (Winter, 2013)
Schematic domain map of plectin (Winter, 2013)


 
== Structures ==


'''1. Actin Binding Domain (ABD)'''
'''1. Actin Binding Domain (ABD)'''


Plectin has a canonical actin binding domain in N-terminus, which is consisted of two calponin homology domain(<scene name='User:Jae-Geun_Song/Workbench/plectin/Plecin_actin_binding_domain/3'>CH1 and CH2</scene>)<ref>PMID:9164454</ref>. N-terminal domain of plectin containing ABD interacts with F-actin and regulates actin dynamics in vivo, additionally binding of plectin ABD to vimentin was also reported <ref>PMID: 15128297</ref>.
<scene name='User:Jae-Geun_Song/Workbench/plectin/Plecin_actin_binding_domain/1'>Plectin</scene> has a canonical actin binding domain in N-terminus, which is consisted of two calponin homology domain(<scene name='User:Jae-Geun_Song/Workbench/plectin/Plecin_actin_binding_domain/3'>CH1 and CH2</scene>)<ref>PMID:9164454</ref>. N-terminal domain of plectin containing ABD interacts with F-actin and regulates actin dynamics in vivo, additionally binding of plectin ABD to vimentin was also reported <ref>PMID: 15128297</ref>.




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'''3. Integrin β4-Plectin complex'''
'''3. Integrin β4-Plectin complex'''
The interaction between the integrin α6β4 and plectin is essential for the assembly and stability of hemidesmosomes, which are junctional adhesion complexes that anchor epithelial cells to the basement membrane.<ref>PMID: 19242489 </ref>
The interaction between the integrin α6β4 and plectin is essential for the assembly and stability of hemidesmosomes, which are junctional adhesion complexes that anchor epithelial cells to the basement membrane.<ref>PMID: 19242489 </ref>
<Structure load='3F7P' size='300' frame='true' align='right' caption='Crystal structure of plectin ABD(magenta) and integrin beta 4 (green) complex  (PDB:3F7P)' scene='Group:MUZIC:Plectin/Plecint/1' />


== Function and Interactions ==
== Function and Interactions ==
<scene name='Group:MUZIC:Plectin/Plecint/1'>Crystal structure of plectin ABD(magenta) and integrin beta 4 (green) complex</scene> (PDB:[[3f7p]])
Proteins coordinate various cytoskeletal networks are termed as cytolinkers, which are able to interlink different types of cytoskeletons. Plectin is one of the well-characterized cytolinker and expressed in diverse cell types and tissues, a number of different binding partners of plectin have been identified.
Proteins coordinate various cytoskeletal networks are termed as cytolinkers, which are able to interlink different types of cytoskeletons. Plectin is one of the well-characterized cytolinker and expressed in diverse cell types and tissues, a number of different binding partners of plectin have been identified.


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In addition, site-specific missense mutation(R2110W) on plectin rod domain causes an autosomal dominant form of disease termed EBS-Ogna without muscular dystrophy.<ref>PMID: 9067706 </ref>
In addition, site-specific missense mutation(R2110W) on plectin rod domain causes an autosomal dominant form of disease termed EBS-Ogna without muscular dystrophy.<ref>PMID: 9067706 </ref>
Plectin deficient(-/-) mice also exhibit similar skin and muscle phenotypes of human patients suffering from EBS-MD and died 2-3 days after birth. <ref>PMID: 9389647</ref>
Plectin deficient(-/-) mice also exhibit similar skin and muscle phenotypes of human patients suffering from EBS-MD and died 2-3 days after birth. <ref>PMID: 9389647</ref>
 
</StructureSection>
== References ==
== References ==




<references/>
<references/>
[[Category: Z-disk]]

Latest revision as of 11:31, 1 July 2015

Human plectin plakin domain (PDB code 3pe0)

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References