3fkk: Difference between revisions

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[[Image:3fkk.png|left|200px]]


{{STRUCTURE_3fkk|  PDB=3fkk  |  SCENE=  }}
==Structure of L-2-keto-3-deoxyarabonate dehydratase==
 
<StructureSection load='3fkk' size='340' side='right'caption='[[3fkk]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
===Structure of L-2-keto-3-deoxyarabonate dehydratase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3fkk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azospirillum_brasilense Azospirillum brasilense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FKK FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[3fkk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_brasilense Azospirillum brasilense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKK OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fkk OCA], [https://pdbe.org/3fkk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fkk RCSB], [https://www.ebi.ac.uk/pdbsum/3fkk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fkk ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/KDADA_AZOBR KDADA_AZOBR] Catalyzes the dehydration of L-2-keto-3-deoxyarabonate (L-KDA) to alpha-ketoglutaric semialdehyde (alphaKGSA). Is involved in a degradation pathway of L-arabinose that allows A.brasilense to grow on L-arabinose as a sole carbon source.<ref>PMID:16950779</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fkk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fkk ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Azospirillum brasilense]]
[[Category: Azospirillum brasilense]]
[[Category: Mikami, B.]]
[[Category: Large Structures]]
[[Category: Shimada, N.]]
[[Category: Mikami B]]
[[Category: Dhdps/nal family]]
[[Category: Shimada N]]
[[Category: Lyase]]