3gbv: Difference between revisions

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[[Image:3gbv.png|left|200px]]


{{STRUCTURE_3gbv|  PDB=3gbv  |  SCENE=  }}
==Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis==
 
<StructureSection load='3gbv' size='340' side='right'caption='[[3gbv]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
===Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis===
== Structural highlights ==
 
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GBV FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[3gbv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBV OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gbv OCA], [https://pdbe.org/3gbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gbv RCSB], [https://www.ebi.ac.uk/pdbsum/3gbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gbv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gbv TOPSAN]</span></td></tr>
[[Category: Bacteroides fragilis]]
</table>
[[Category: Burley, S K.]]
== Evolutionary Conservation ==
[[Category: Ibrahim, B Syed.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Kumaran, D.]]
Check<jmol>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  <jmolCheckbox>
[[Category: Swaminathan, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/3gbv_consurf.spt"</scriptWhenChecked>
[[Category: 11231j]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Dna-binding]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: New york sgx research center for structural genomic]]
  </jmolCheckbox>
[[Category: New york structural genomix research consortium]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gbv ConSurf].
[[Category: Nysgxrc]]
<div style="clear:both"></div>
[[Category: Protein structure initiative]]
__TOC__
[[Category: Psi-ii]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Transcription]]
[[Category: Burley SK]]
[[Category: Transcription regulation]]
[[Category: Kumaran D]]
[[Category: Transcription regulator]]
[[Category: Swaminathan S]]
[[Category: Transcriptional regulator]]
[[Category: Syed Ibrahim B]]

Latest revision as of 01:50, 21 November 2024

Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis

3gbv, resolution 2.20Å

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