3gk5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3gk5.png|left|200px]]


{{STRUCTURE_3gk5|  PDB=3gk5  |  SCENE=  }}
==Crystal structure of rhodanese-related protein (TVG0868615) from Thermoplasma volcanium, Northeast Structural Genomics Consortium Target TvR109A==
 
<StructureSection load='3gk5' size='340' side='right'caption='[[3gk5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
===Crystal structure of rhodanese-related protein (TVG0868615) from Thermoplasma volcanium, Northeast Structural Genomics Consortium Target TvR109A===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3gk5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_volcanium_GSS1 Thermoplasma volcanium GSS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GK5 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gk5 OCA], [https://pdbe.org/3gk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gk5 RCSB], [https://www.ebi.ac.uk/pdbsum/3gk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gk5 ProSAT], [https://www.topsan.org/Proteins/NESGC/3gk5 TOPSAN]</span></td></tr>
[[3gk5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoplasma_volcanium_gss1 Thermoplasma volcanium gss1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GK5 OCA].  
</table>
[[Category: Thermoplasma volcanium gss1]]
== Function ==
[[Category: Acton, T B.]]
[https://www.uniprot.org/uniprot/Q97AG6_THEVO Q97AG6_THEVO]  
[[Category: Belote, R L.]]
== Evolutionary Conservation ==
[[Category: Ciccosanti, C.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Everett, J K.]]
Check<jmol>
[[Category: Foote, E L.]]
  <jmolCheckbox>
[[Category: Forouhar, F.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/3gk5_consurf.spt"</scriptWhenChecked>
[[Category: Hunt, J F.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Mao, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Montelione, G T.]]
  </jmolCheckbox>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gk5 ConSurf].
[[Category: Nair, R.]]
<div style="clear:both"></div>
[[Category: Rost, B.]]
__TOC__
[[Category: Seetharaman, J.]]
</StructureSection>
[[Category: Su, M.]]
[[Category: Large Structures]]
[[Category: Tong, L.]]
[[Category: Thermoplasma volcanium GSS1]]
[[Category: Xiao, R.]]
[[Category: Acton TB]]
[[Category: Alpha-beta protein]]
[[Category: Belote RL]]
[[Category: Nesg]]
[[Category: Ciccosanti C]]
[[Category: Northeast structural genomics consortium]]
[[Category: Everett JK]]
[[Category: Protein structure initiative]]
[[Category: Foote EL]]
[[Category: Psi-2]]
[[Category: Forouhar F]]
[[Category: Structural genomic]]
[[Category: Hunt JF]]
[[Category: Unknown function]]
[[Category: Mao L]]
[[Category: Montelione GT]]
[[Category: Nair R]]
[[Category: Rost B]]
[[Category: Seetharaman J]]
[[Category: Su M]]
[[Category: Tong L]]
[[Category: Xiao R]]