3h5q: Difference between revisions

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[[Image:3h5q.png|left|200px]]


{{STRUCTURE_3h5q|  PDB=3h5q  |  SCENE=  }}
==Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus aureus==
 
<StructureSection load='3h5q' size='340' side='right'caption='[[3h5q]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
===Crystal structure of a putative pyrimidine-nucleoside phosphorylase from Staphylococcus aureus===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3h5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_COL Staphylococcus aureus subsp. aureus COL]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H5Q FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=THM:THYMIDINE'>THM</scene></td></tr>
[[3h5q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H5Q OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h5q OCA], [https://pdbe.org/3h5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h5q RCSB], [https://www.ebi.ac.uk/pdbsum/3h5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h5q ProSAT], [https://www.topsan.org/Proteins/CSGID/3h5q TOPSAN]</span></td></tr>
[[Category: Pyrimidine-nucleoside phosphorylase]]
</table>
[[Category: Staphylococcus aureus]]
== Function ==
[[Category: Anderson, W F.]]
[https://www.uniprot.org/uniprot/PDP_STAAC PDP_STAAC]  
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
== Evolutionary Conservation ==
[[Category: Cymborowski, M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Minor, W.]]
Check<jmol>
[[Category: Onopriyenko, O.]]
  <jmolCheckbox>
[[Category: Savchenko, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/3h5q_consurf.spt"</scriptWhenChecked>
[[Category: Shumilin, I A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Skarina, T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Zimmerman, M.]]
  </jmolCheckbox>
[[Category: Center for structural genomics of infectious disease]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h5q ConSurf].
[[Category: Csgid]]
<div style="clear:both"></div>
[[Category: Glycosyltransferase]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Transferase]]
[[Category: Large Structures]]
[[Category: Staphylococcus aureus subsp. aureus COL]]
[[Category: Anderson WF]]
[[Category: Cymborowski M]]
[[Category: Minor W]]
[[Category: Onopriyenko O]]
[[Category: Savchenko A]]
[[Category: Shumilin IA]]
[[Category: Skarina T]]
[[Category: Zimmerman M]]
Retrieved from "https://proteopedia.org/3h5q"