4dr8: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal structure of a peptide deformylase from Synechococcus elongatus== | |||
<StructureSection load='4dr8' size='340' side='right'caption='[[4dr8]], [[Resolution|resolution]] 1.55Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4dr8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_6301 Synechococcus elongatus PCC 6301]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DR8 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dr8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dr8 OCA], [https://pdbe.org/4dr8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dr8 RCSB], [https://www.ebi.ac.uk/pdbsum/4dr8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dr8 ProSAT]</span></td></tr> | ||
[[4dr8]] is a 4 chain structure with sequence from [ | </table> | ||
[[Category: | == Function == | ||
[[Category: Synechococcus elongatus | [https://www.uniprot.org/uniprot/A0A0H3JZJ4_SYNP6 A0A0H3JZJ4_SYNP6] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] | ||
[[Category: Abendroth | __TOC__ | ||
[[Category: Burgin | </StructureSection> | ||
[[Category: Craig | [[Category: Large Structures]] | ||
[[Category: Lorimer | [[Category: Synechococcus elongatus PCC 6301]] | ||
[[Category: Rohwer | [[Category: Abendroth J]] | ||
[[Category: Segall | [[Category: Burgin A]] | ||
[[Category: Craig T]] | |||
[[Category: Lorimer D]] | |||
[[Category: Rohwer F]] | |||
[[Category: Segall A]] | |||
Latest revision as of 14:42, 14 March 2024
Crystal structure of a peptide deformylase from Synechococcus elongatus
| ||||||||||||
