4dv6: Difference between revisions

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{{Large structure}}
{{STRUCTURE_4dv6|  PDB=4dv6  |  SCENE=  }}
===Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G===


==About this Structure==
==Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G==
[[4dv6]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DV6 OCA].  
<StructureSection load='4dv6' size='340' side='right'caption='[[4dv6]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
[[Category: Thermus thermophilus]]
== Structural highlights ==
[[Category: Dahlberg, A E.]]
<table><tr><td colspan='2'>[[4dv6]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DV6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DV6 FirstGlance]. <br>
[[Category: Demirci, H.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.297&#8491;</td></tr>
[[Category: Gregory, S T.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: IV, F Murphy.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dv6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dv6 OCA], [https://pdbe.org/4dv6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dv6 RCSB], [https://www.ebi.ac.uk/pdbsum/4dv6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dv6 ProSAT]</span></td></tr>
[[Category: Jogl, G.]]
</table>
[[Category: Murphy, E.]]
== Function ==
[[Category: Antibiotic resistance]]
[https://www.uniprot.org/uniprot/RS5_THET8 RS5_THET8] With S4 and S12 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_01307_B]  Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01307_B]
[[Category: Decoding]]
 
[[Category: Ribosome]]
==See Also==
[[Category: Rna structure]]
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
[[Category: Streptomycin]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Dahlberg AE]]
[[Category: Demirci H]]
[[Category: Gregory ST]]
[[Category: Jogl G]]
[[Category: Murphy E]]
[[Category: Murphy IV F]]
Retrieved from "https://proteopedia.org/4dv6"