4dv0: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Large structure}}
{{STRUCTURE_4dv0|  PDB=4dv0  |  SCENE=  }}
===Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G===


==About this Structure==
==Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G==
[[4dv0]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DV0 OCA].  
<StructureSection load='4dv0' size='340' side='right'caption='[[4dv0]], [[Resolution|resolution]] 3.85&Aring;' scene=''>
[[Category: Thermus thermophilus]]
== Structural highlights ==
[[Category: Dahlberg, A E.]]
<table><tr><td colspan='2'>[[4dv0]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DV0 FirstGlance]. <br>
[[Category: Demirci, H.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.853&#8491;</td></tr>
[[Category: Gregory, S T.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: IV, F Murphy.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dv0 OCA], [https://pdbe.org/4dv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dv0 RCSB], [https://www.ebi.ac.uk/pdbsum/4dv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dv0 ProSAT]</span></td></tr>
[[Category: Jogl, G.]]
</table>
[[Category: Murphy, E.]]
== Function ==
[[Category: Antibiotic resistance]]
[https://www.uniprot.org/uniprot/RS5_THET8 RS5_THET8] With S4 and S12 plays an important role in translational accuracy (By similarity).[HAMAP-Rule:MF_01307_B]  Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01307_B]
[[Category: Decoding]]
 
[[Category: Ribosome]]
==See Also==
[[Category: Rna structure]]
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
[[Category: Streptomycin]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Dahlberg AE]]
[[Category: Demirci H]]
[[Category: Gregory ST]]
[[Category: Jogl G]]
[[Category: Murphy E]]
[[Category: Murphy IV F]]
Retrieved from "https://proteopedia.org/4dv0"